Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876169.1_cds_XP_016436029.1_31931
CDS Infomation

[gene=LOC107762206] [db_xref=GeneID:107762206] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016436029.1] [location=complement(join(11268..11419,11640..11711,11785..11857,13931..14021,14106..14179,14307..14469,14825..15049,15840..16087,16169..16298,17479..17723))] [gbkey=CDS]
Sequence

ATGGTGAAGATAATGGATCTGAGGAGAAATGGGTATTTGATACTTTTTTTGGTTTTGTTG
GGTGGTGATTATGAGGTAAGTGTGAAGGGGGAGAATAATGTGGTTTTCAGTGTGGAGCAT
AAATTTGGTGGGCGTGGAAGGTCTGTTTTGAAGGACCTTAAAGACCACGATGTCCATCGT
CACGGCAGAATGCTCGCCGCCGCCGACTTCCTATTGGGTGGCAACGGCAGTCCCACCGGT
GCAGCGCTATATTTCACTAAGCTTTCAATTGGGACACCTTCAAAGGACTATCATGTCCAG
GTAGATACTGGAAGCGATCTTTTTTGGGTAAACTGTGCACGCTGTCTCAAATGTCCTACA
AAAAGCAAACTCGGGATAGATTTAGTGCAATATGACTTACAAGCCTCAACAACTGGGAAA
TTTATTACCTGCGAGCAAGATGTTTGCACTACTATGTTCGATGCAGCCAGTTCCGAATGC
AAGGTCGGAAAGCCCTGTGAATATTTGGTTACTTATGGAGATGGCAGCTCAACTGGAGGA
TACTTTGTAAAAGATAACATCTATTTAGATCAAGTGTCTGGAGATTATAAAACATCTTCC
TTACAGGGATCCGTTGCATTTGGGTGCTCGTCTCAGCAATCTGGAGACCTAGGTACATCT
ACTAATGCAGTTGATGGGATAATTGGTTTTGGAGAAGCAAATTCGTCCGTCATCTCGCAG
TTAGCTGCAGCTGGAACGGTGAAAAAAATGTTTGCACATTGCCTGGACGGAGTTAAAGGA
GGTGGTATATTTGCTATTGGACAAGTAGTTGAGCCAAAAGTAAATTCAGCCCCATTACTC
CCGAATAGGGCACATTATACTCTTTCTCTGAAGGATATTGAGGTTGGTAAAGAAGTTCTA
GACATCCCGACTTCCCTCTTTGAGTCGAAATCCAGTAAAAAAGCAATAATTGACAGTGGA
ACAACTTTAGTATATCTTCCGAGCAAGGCCTATAATGCTCTCATGAACAAGTTAATGTCA
AAGCAACCACAATTGAAGACTCATCATCTTGACGGGGACTTTGACTGCTTTATCTACAGC
GGAAATGTCGACGACGGTTTCCCAGCTGTAACATTTCAGTTTGTGGGAAATCTTTCTTTG
ACAGCTTATCCCCATGATTATCTTTTTGAAGTTCGTGATAATGAATGGTGCATTGGTTGG
CAGGAGGGAACGCAGGGAAAGGATGGAAATGAAATCTATCTGTTAGGAGATCTTCTGTTA
TCAAACAAGCTTGTTCTGTATGATCTTGAGAAACAGACCATTGGTTGGACTCAATATGAC
TGCTCGTCGAGCATTAAAGTGAAAGACGAAACTTCTGGAAATGTGTATACAGTGGGTGCT
CACAAGATTTCATCAGCGTCTAGTTTGGATTCAAGAATGGCTTTTACGTTCTTCTTCTCA
GTTATCTCTTTCTTCTGCTTTTTGTTGAAGTGA

Peptide Sequence

PEP ID

XP_016436029.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MVKIMDLRRNGYLILFLVLLGGDYEVSVKGENNVVFSVEHKFGGRGRSVLKDLKDHDVHR
HGRMLAAADFLLGGNGSPTGAALYFTKLSIGTPSKDYHVQVDTGSDLFWVNCARCLKCPT
KSKLGIDLVQYDLQASTTGKFITCEQDVCTTMFDAASSECKVGKPCEYLVTYGDGSSTGG
YFVKDNIYLDQVSGDYKTSSLQGSVAFGCSSQQSGDLGTSTNAVDGIIGFGEANSSVISQ
LAAAGTVKKMFAHCLDGVKGGGIFAIGQVVEPKVNSAPLLPNRAHYTLSLKDIEVGKEVL
DIPTSLFESKSSKKAIIDSGTTLVYLPSKAYNALMNKLMSKQPQLKTHHLDGDFDCFIYS
GNVDDGFPAVTFQFVGNLSLTAYPHDYLFEVRDNEWCIGWQEGTQGKDGNEIYLLGDLLL
SNKLVLYDLEKQTIGWTQYDCSSSIKVKDETSGNVYTVGAHKISSASSLDSRMAFTFFFS
VISFFCFLLK

Transcript Sequence

Gene sequence data has not been registered.